Albums
- 2004-06-05: Theater of the Living Arts, Philadelphia, PA, USA
- 2004-06-12: Bonnaroo Music Festival, Manchester, TN, USA
- Acoustic Citsuoca
- At Dawn
- Celebración De La Ciudad Natal
- Chapter 1: The Sandworm Cometh - Early Recordings, B-Sides, Covers, y Mas
- Chapter 1: The Sandworm Cometh: Early Recordings
- Chocolate And Ice
- Chocolate and Ice EP
- Circuital
- Evil Urges
- He's Just Not That Into You: Original Motion Picture Soundtrack
- Heartbreakin Man
- I'm Amazed
- It Still Moves
- It Still Moves - ATO Records
- My Morning Jacket Live at 9:30 Club 08/16/2002
- Okonokos
- Run Thru
- Sweatbees EP
- The Tennessee Fire
- Z
Songs
- Aluminum Park
- Anytime
- At Dawn
- Bermuda Highway
- Butch Cassidy
- By My Car
- Dancefloors
- Death Is the Easy Way
- Dondante
- Easy Morning Rebel
- Evil Urges
- First Light
- Gideon
- Golden
- Highly Suspicious
- Honest Man
- Hopefully
- I Needed It Most
- I Think I'm Going to Hell
- I Will Be There When You Die
- I Will Sing You Songs
- I'm Amazed
- If All Else Fails
- If It Smashes Down
- Into the Woods
- It Beats 4 U
- It Beats For You
- Just Because I Do
- Just One Thing
- Knot Comes Loose
- Lay Low
- Lowdown
- Mahgeetah
- Master Plan
- Masterplan
- My Morning Jacket - Two Halves
- Nashville to Kentucky
- Off the Record
- Old Sept Blues
- Old September Blues
- One Big Holiday
- One in the Same
- Phone Went West
- Picture of You
- Rocket Man
- Rollin Back
- Run Thru
- Sooner
- Steam Engine
- Strangulation
- Strangulation!
- Thank You Too!
- The Bear
- The Dark
- The Way That He Sings
- They Ran
- Touch Me I'm Going To Scream Pt. 1
- Touch Me I`m Going to Scream, Part 2
- Two Halves
- Victory Dance
- War Begun
- What a Wonderful Man
- Wordless Chorus
- X-mas Curtain
